Davidson, K., D.M. Anderson, M. Mateus, B. Reguera, J. Silke, M. Sourisseau and J. Maguire (2016). Forecasting the risk of harmful algal blooms. Harmful Algae, 53:1-7. 
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Maguire, J.A. (2014) The battle of biofouling: implications for the aquaculture industry. J. of Ocean Technology. 9:4:4-5
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Ottesen O.H., Treasurer J., Fitzgerald R., Maguire J., Rebours C., (2012). EcoFish project: using wrasse as cleaner fish in salmon farming. Global Aquaculture Advocate, 15(2):24-25.

Frangoudes K., Jacob C., Lesueur M., Mesnildrey L., Spinec F., Folliard G., Pien S., Rebours C., Meland M., Gallastegi I., Inunziaga Urizarbarrena A., Marques A., Atack T., Dunningham J., Maguire J., Abreu H and M. Walsh (2012). Seaweed industry in Europe: a guide to better practice. An output of the Netalgae project - Interreg IVB, AGROCAMPUS ed. 8 p.
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Frangoudes K., Jacob C., Lesueur M., Mesnildrey L., Spinec F., Folliard G., Pien S., Rebours C., Meland M., Gallastegi I., Inunziaga Urizarbarrena A., Marques A., Atack T., Dunningham J., Maguire J., Abreu H. and M. Walsh (2012). Seaweed industry in Europe. An output of the Netalgae project - Interreg IVB, AGROCAMPUS ed. 12 p.
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D'Arcy, J., Dunaevskaya, E., Treasurer, J.W., Ottesen, O., Maguire, J.A., Zhuravleva, N., Karlsen, A., Rebours C. and R.D. FitzGerald (2012). Embryonic development in ballan wrasse Labrus bergylta. Journal of Fish Biology, 81:3:1101-10. 
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Ottesen O.H., Treasurer J., Fitzgerald R., Maguire J., Rebours C., Zhuravleva N.,(2008). Ballan Wrasse Offer Efficient, Environmentally Friendly Sea Lice Control. Global Aquaculture Advocate, 11(6):44-45. 
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Maguire, J. A., T. Knights, G. Burnell, T. Crowe, D. McGrath, M. Ferns, N. McDonough, N. McQuaid, B. O’Connor, R. Doyle, C. Newell, R. Seed, A. Smaal, T. O’Carroll, L. Watson, J. Dennis, F. O’Beirn and M. O’Cinneide (2007) Management recommendations for the sustainable exploitation of mussel seed in the Irish Sea. Marine Environment Health Series No. 31. ISSN: 1649-0053. 87p
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Maguire, J. A., M. O’Donoghue, S. Jenkins, A. Brand and G. M. Burnell (2002). Temporal and spatial variability in dredging induced stress in the great scallop Pecten maximus (L.). The Journal of Shellfish Research. 21:1:81-86 

Maguire, J. A., S. Jenkins and G. M. Burnell (2002) Effects of repeated dredging and speed of tow on undersized scallops. Fisheries Research. 58:3:367-377